PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08903
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 176aa    MW: 20271.7 Da    PI: 9.4453
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08903genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-0883106124
                      TSSS-HHHHHHHHHHHHHTTTT-H CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtW 24 
                      +g+WT+eEd++++d+v+++G   W
         EMT08903  83 KGPWTQEEDDKIIDLVNKYGLTKW 106
                      79******************8887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.59E-776107IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.2E-978106IPR009057Homeodomain-like
PROSITE profilePS500906.84178106IPR017877Myb-like domain
PfamPF002492.8E-683106IPR001005SANT/Myb domain
CDDcd001679.25E-685106No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MSHLLFLVLL RTLMGGVCLQ RRTDNSDSMP RTAQGSYHFL FYQLSIFPTL KFGDKEKMNY  60
FRIGQRCNVY IHGRRFFNTE LIKGPWTQEE DDKIIDLVNK YGLTKWLHCK LPELPAADPG  120
MFPNMLPNML NLSALGQVTR HAWRVYFGGL PPIANEQTVA LFFNQVMAAI GETRLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2364943e-51HQ236494.1 Triticum aestivum MYB3R transcription factor (MYB3R1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8C1341e-131M8C134_AEGTA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.22e-11myb domain protein 3r-5